diff --git a/src/formatitko/formatitko.py b/src/formatitko/formatitko.py
index 240295b..e192c86 100755
--- a/src/formatitko/formatitko.py
+++ b/src/formatitko/formatitko.py
@@ -14,8 +14,9 @@ from .images import ImageProcessor
 from .output_generator import OutputGenerator
 from .html_generator import HTMLGenerator
 from .transform_processor import TransformProcessor
+from .pandoc_processor import PandocProcessor
 
-from .mj_show import show
+from panflute import convert_text
 
 def main():
 	# Initialize command line arguments
@@ -24,8 +25,10 @@ def main():
 	parser.add_argument("-p", "--img-public-dir", help="Directory to put processed images into. The program will overwrite images, whose dependencies are newer.", default="public")
 	parser.add_argument("-c", "--img-cache-dir", help="Directory to cache processed images and intermediate products. The program will overwrite files, whose dependencies are newer.", default="cache")
 	parser.add_argument("-i", "--img-web-path", help="Path where the processed images are available on the website.", default="/")
-	parser.add_argument("-w", "--output-html", help="The HTML file (for Web) to write into.", default="output.html")
-	parser.add_argument("-t", "--output-tex", help="The TEX file to write into.", default="output.tex")
+	parser.add_argument("-w", "--output-html", help="The HTML file (for Web) to write into.")
+	parser.add_argument("-t", "--output-tex", help="The TEX file to write into.")
+	parser.add_argument("-m", "--output-md", help="The Markdown file to write into. (Uses pandoc to generate markdown)")
+	parser.add_argument("-j", "--output-json", help="The JSON file to dump the pandoc-compatible AST into.")
 	parser.add_argument("input_filename", help="The markdown file to process.")
 	parser.add_argument("--debug", action='store_true')
 	args = parser.parse_args()
@@ -33,44 +36,30 @@ def main():
 	# just connect to an existing one. For formátíking many files in a row.
 
 	# Use panflute to parse the input MD file
-	#doc1 = import_md(open(args.input_filename, "r").read())
-	doc2 = import_md(open(args.input_filename, "r").read())
+	doc = import_md(open(args.input_filename, "r").read())
 
 	if args.debug:
-		print(show(doc1))
+		OutputGenerator(sys.stdout).generate(doc)
 
-	# The language metadatum is important, so it's read before transformation and
-	# then attached to a group inside the Doc
-	#language = doc1.get_metadata("lang", None, True)
-	#context = Context(doc1, args.input_filename)
-
-	# Transform the document. This includes all the fancy formatting this software does.
-	#doc1 = doc1.walk(transform, context)
-
-	# Now wrap the document contents in a group, which is able to pop its language
-	# setting out to TeX
-	#doc1.content = [BlockGroup(*doc1.content, context=context, metadata={"lang":language})]
-
-	doc2 = TransformProcessor(args.input_filename).transform(doc2)
+	doc = TransformProcessor(args.input_filename).transform(doc)
 
 	# Initialize the image processor (this just keeps some basic state)
 	imageProcessor = ImageProcessor(args.img_public_dir, args.img_web_path, args.img_cache_dir, *args.img_lookup_dirs)
 
-	# Initialize KaTeX client (this runs the node app and connects to a unix socket)
-	with KatexClient() as katexClient:
-		# Generate HTML and TeX out of the transformed document
-		#open(args.output_html, "w").write(html(doc, katexClient, imageProcessor))
-		#open(args.output_tex, "w").write(tex(doc, imageProcessor))
-		HTMLGenerator(sys.stdout, katexClient, imageProcessor).generate(doc2)
-		#OutputGenerator(open("/tmp/doc1", "w")).generate(doc1)
-		#OutputGenerator(open("/tmp/doc2", "w")).generate(doc2)
+	if args.output_html is not None:
+		# Initialize KaTeX client (this runs the node app and connects to a unix socket)
+		with KatexClient() as katexClient:
+			HTMLGenerator(open(args.output_html, "w"), katexClient, imageProcessor).generate(doc)
+
+	if args.output_md is not None:
+		open(args.output_md, "w").write(convert_text(PandocProcessor().transform(doc), input_format="panflute", output_format="markdown"))
 
-	from panflute import convert_text
-	from .pandoc_processor import PandocProcessor
-	open("/tmp/bruhecek.md", "w").write(convert_text(PandocProcessor().transform(doc2), input_format="panflute", output_format="markdown"))
+	if args.output_json is not None:
+		open(args.output_json, "w").write(convert_text(PandocProcessor().transform(doc), input_format="panflute", output_format="json"))
 
 	if args.debug:
-		print(show(doc))
+		print("-----------------------------------")
+		OutputGenerator(sys.stdout).generate(doc)
 
 
 if __name__ == "__main__":